State-space analysis on time-varying correlations in parallel spike sequences

Hideaki Shimazaki, Shun Ichi Amari, Emery N. Brown, Sonja Grün

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

11 Scopus citations

Abstract

A state-space method for simultaneously estimating timedependent rate and higher-order correlation underlying parallel spike sequences is proposed. Discretized parallel spike sequences are modeled by a conditionally independent multivariate Bernoulli process using a log-linear link function, which contains a state of higher-order interaction factors. A nonlinear recursive filtering formula is derived from a logquadratic approximation to the posterior distribution of the state. Together with a fixed-interval smoothing algorithm, time-dependent log-linear parameters are estimated. The smoothed estimates are optimized via EM-algorithm such that their prior covariance matrix maximizes the expected complete data log-likelihood. In addition, we perform model selection on the hierarchical log-linear state-space models to avoid over-fitting. Application of the method to simultaneously recorded neuronal spike sequences is expected to contribute to uncover dynamic cooperative activities of neurons in relation to behavior.

Original languageEnglish
Title of host publication2009 IEEE International Conference on Acoustics, Speech, and Signal Processing - Proceedings, ICASSP 2009
Pages3501-3504
Number of pages4
DOIs
StatePublished - 2009
Externally publishedYes
Event2009 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2009 - Taipei, Taiwan, Province of China
Duration: 19 Apr 200924 Apr 2009

Publication series

NameICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings
ISSN (Print)1520-6149

Conference

Conference2009 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2009
Country/TerritoryTaiwan, Province of China
CityTaipei
Period19/04/0924/04/09

Keywords

  • Correlation
  • Generalized linear model
  • Information geometry
  • Point processes
  • State space methods

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